Dudman Lab · Research archive

Publications

Neural circuits Behavior Computation Open resources
Complete archive

Published work.

Browse the lab’s publications by year, with direct links to articles, preprints, data, code, and project materials. For the latest automatically maintained record, visit Google Scholar.

2026

Reward magnitude determines reinforcement learning efficiency

Science 392(6800): eaeb0813

A global dopaminergic learning rate enables adaptive foraging across many options

Neuron 10.1016/j.neuron.2026.04.010

Evolutionarily conserved neural dynamics across mice, monkeys, and humans

bioRxiv 10.64898/2026.03.06.709637

Correlates of head-fixed directional forelimb movements in mouse superior colliculus and substantia nigra pars reticulata

Neuroscience 10.1016/j.neuroscience.2026.02.010

Composing trajectories for rapid inference of navigational goals

Neuron 10.1016/j.neuron.2026.05.030

2025

Conjoint specification of action by neocortex and striatum

Neuron 113(4): 620-636.e6

Cortical control of innate behavior from subcortical demonstration

preprint

Volition and vigor

Handbook of Behavioral Neuroscience 32: 329-343

2024

Discovery of neuronal cell types by pairing whole cell reconstructions with RNA expression profiles

bioRxiv 10.1101/2024.12.30.630829

Nonlinear manifolds underlie neural population activity during behaviour

preprint

Integrating across behaviors and timescales to understand the neural control of movement

Current Opinion in Neurobiology 85: 102843

2023

Preserved neural population dynamics across animals performing similar behaviour

Nature 623: 765-771

Mesolimbic dopamine adapts the rate of learning from action

Nature 614: 294-302

2022

Hippocampal representations of foraging trajectories depend upon spatial context

Nature Neuroscience 25: 1693-1705

Motor cortical output is selectively distributed across projection neuron classes

Science Advances 10.1126/sciadv.abj5167

2021

Dissociable contributions of phasic dopamine activity to reward and prediction

Cell Reports 10.1016/j.celrep.2021.109684

Neuron-type specificity of dorsal raphe projections to ventral tegmental area

biorxiv 10.1101/2021.01.06.425641

2020

Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings

Science 372(6539)

2019

Basal ganglia circuits for action specification

Annual Reviews in Neuroscience

Learning from action: reconsidering movement signaling in midbrain dopamine neuron activity

Neuron 104(1): 63-77

A repeated molecular architecture across thalamic pathways

Nature Neuroscience

Reconstruction of 1,000 projection neurons reveals new cell types and long-range connectivity

Cell 179(1): 268-81

2018

Expansion of the Optogenetics Toolkit through Topological Inversion of Rhodopsins

Cell 175(4):1131-1140

High-Throughput Synapse-Resolving Two-Photon Fluorescence Microendoscopy In Vivo

eLife 8:e40805

The timing of action determines reward expectation signals in dopamine neurons

Nature Neuroscience 21(11):1563-1573

A proposed circuit computation in basal ganglia: history dependent gain

Movement Disorders 33(5):704-16

2017

Desensitized D2 autoreceptors are resistant to trafficking

Scientific Reports 7: 4379

Deconstructing behavioral neuropharmacology with cellular specificity

Science 356: eaaj2161

2016

Behavioral evidence for feedback gain control by the substantia nigra

biorxiv 10.1101/090209

Efficient retrograde access to projection neurons with a designer AAV

Neuron 92(2):372–82

Opponent and bidirectional control of movement velocity in the basal ganglia

Nature 533(7603):402-6

The basal ganglia: from motor commands to the control of vigor

Current Opinion in Neurobiology 37:158-166

2015

A minimally invasive microendoscopy system for in vivo functional imaging

Biomedical Optics Express 6(11): 4546-56

Dopamine is required for the neural representation and control of movement vigor

Cell 162(6): 1418-30

A specific component of the evoked potential mirrors phasic dopamine neuron activity during conditioning

Journal of Neuroscience 35(29): 10451-10459

2014

The inhibitory microcircuit of the substantia nigra provides feedback gain control

eLife 3:e02397

Precise spatial coding is preserved along the longitudinal hippocampal axis

Hippocampus 24(12):1533-48

Chapter 17: The Basal Ganglia

The Rat Nervous System 4th edition

2013

Mice infer probabilistic models for timing

PNAS 110(42): 17154-17159

RIVETS: a 3D printable system for in vivo and in vitro electrophysiology and imaging

PLoS ONE 9(2): e89007

Neural signals of extinction in the inhibitory microcircuit of the ventral midbrain

Nature Neuroscience 16(1):71-8

2010

Inputs to the dorsal striatum of the mouse conserve the parallel architecture of the forebrain

Frontiers in Neuroanatomy 4:147

2009

Stochastically gating ion channels enable patterned spike firing

PLoS Computational Biology 5(2):e1000290

Explore our research program

Research